logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Gene Cluster: MGYG000000175_8|CGC1

You are here: cgc->  ?help

CGC gene composition diagram | Gene composition table | Substrate predicted by eCAMI subfamily  |  Substrate predicted by dbCAN-PUL search  |  Genomic context 

CGC gene composition diagram

Gene composition table

Protein ID Protein Name Type Start End Strand Signature
MGYG000000175_01688
hypothetical protein
TC 32156 33310 - 2.A.1.7.6
MGYG000000175_01689
hypothetical protein
CAZyme 33341 36016 - CBM67| GH78
MGYG000000175_01690
Uronate isomerase
null 36080 37375 - Amidohydro_2
MGYG000000175_01691
hypothetical protein
null 37445 38587 - URO-D
MGYG000000175_01692
hypothetical protein
CAZyme 38633 41614 - GH38
MGYG000000175_01693
hypothetical protein
null 41604 41804 - No domain
MGYG000000175_01694
Trehalose transport system permease protein SugB
TC 41864 42688 - 3.A.1.1.41
MGYG000000175_01695
Lactose transport system permease protein LacF
TC 42704 43570 - 3.A.1.1.47
MGYG000000175_01696
Multiple sugar-binding protein
STP 43769 45076 - SBP_bac_1
MGYG000000175_01697
hypothetical protein
TC 45321 47090 + 8.A.59.2.1
MGYG000000175_01698
HTH-type transcriptional activator RhaR
TF 47094 48641 + HTH_AraC+HTH_AraC
MGYG000000175_01699
HTH-type transcriptional regulator DegA
TF 48646 49665 + LacI
MGYG000000175_01700
Multidrug resistance protein MdtK
TC 50235 51119 + 2.A.66.1.10
MGYG000000175_01701
Oligo-1,6-glucosidase
CAZyme 51159 52841 + GH13| GH13_31
MGYG000000175_01702
Oligo-1,6-glucosidase
CAZyme 52873 54585 + GH13| GH13_31
Protein ID Protein Name Type Start End Strand Signature

Substrate predicted by eCAMI subfamilies is starch

Protein ID eCAMI subfam CAZyme substrate
MGYG000000175_01689 GH78_e9
MGYG000000175_01692 GH38_e14|3.2.1.24 hostglycan
MGYG000000175_01701 GH13_e184|3.2.1.93|3.2.1.20 trehalose|starch
MGYG000000175_01702 GH13_e0|5.4.99.11|3.2.1.70|3.2.1.20|3.2.1.10|3.2.1.-|2.4.1.- sucrose|starch

Substrate predicted by dbCAN-PUL is starch download this fig


Genomic location